update_analytic_f0.cpp File Reference

#include <Kokkos_Atomic.hpp>
#include "timer_macro.hpp"
#include "space_settings.hpp"
#include "basic_physics.hpp"
#include "linear_weights.hpp"
#include "update_analytic_f0.hpp"
#include "toroidal_average.hpp"
#include "task_group.hpp"
#include "charge_f0.hpp"
#include "loadable_buffer.hpp"
#include "view_arithmetic.hpp"

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Functions
void	get_total_density (const DomainDecomposition< DeviceType > &pol_decomp, const Grid< DeviceType > &grid, const Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &density_f0g, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &total_density)
void	normalize_by_volume (const Grid< DeviceType > &grid, const DomainDecomposition< DeviceType > &pol_decomp, const Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &total_density, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &flow, const View< double *, CLayout, DeviceType > &energy)
void	remove_adiabatic_response (const DomainDecomposition< DeviceType > &pol_decomp, const ElectricField< DeviceType > &electric_field, const Species< DeviceType > &species, double dpot_te_limit, const View< double *, CLayout, DeviceType > &energy, const View< double *, CLayout, DeviceType > &density)
View< double **, CLayout, DeviceType >	compute_damped_delta (const DomainDecomposition< DeviceType > &pol_decomp, const Grid< DeviceType > &grid, const MagneticField< DeviceType > &magnetic_field, const Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &flow, const View< double *, CLayout, DeviceType > &energy, double damping_width, double base_alpha)
void	smooth_and_filter (const Grid< DeviceType > &grid, const MagneticField< DeviceType > &magnetic_field, const DomainDecomposition< DeviceType > &pol_decomp, Smoothing &smoothing, View< double **, CLayout, DeviceType > &damped_delta)
void	bound_moments (const DomainDecomposition< DeviceType > &pol_decomp, const Grid< DeviceType > &grid, const MagneticField< DeviceType > &magnetic_field, const Species< DeviceType > &species, const View< double **, CLayout, DeviceType > &damped_delta, const View< double *, CLayout, DeviceType > &density_adjustment, const View< double *, CLayout, DeviceType > &flow_adjustment, const View< double *, CLayout, DeviceType > &energy_adjustment)
void	flux_surface_average_moments (const Grid< DeviceType > &grid, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &flow, const View< double *, CLayout, DeviceType > &energy)
void	calculate_delta_moments (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const MagneticField< DeviceType > &magnetic_field, const DomainDecomposition< DeviceType > &pol_decomp, Smoothing &smoothing, const Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &flow, const View< double *, CLayout, DeviceType > &energy, const View< double *, CLayout, DeviceType > &density_adjustment, const View< double *, CLayout, DeviceType > &flow_adjustment, const View< double *, CLayout, DeviceType > &energy_adjustment)
View< double **, CLayout, DeviceType >	get_density_f0g_rho (const Grid< DeviceType > &grid, const VelocityGrid &vgrid, const DomainDecomposition< DeviceType > &pol_decomp, const Species< DeviceType > &species)
void	normalize_and_remove_adiabatic_term (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const DomainDecomposition< DeviceType > &pol_decomp, const ElectricField< DeviceType > &electric_field, Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &flow, const View< double *, CLayout, DeviceType > &energy, const View< double *, CLayout, DeviceType > &total_density)
void	update_species_f0_deltas (const DomainDecomposition< DeviceType > &pol_decomp, Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &density_adjustment, const View< double *, CLayout, DeviceType > &flow_adjustment, const View< double *, CLayout, DeviceType > &energy_adjustment)
void	get_moments (const Grid< DeviceType > &grid, const MagneticField< DeviceType > &magnetic_field, Species< DeviceType > &species, Kokkos::View< double **, Kokkos::LayoutRight, DeviceType > &density, Kokkos::View< double **, Kokkos::LayoutRight, DeviceType > &flow, Kokkos::View< double **, Kokkos::LayoutRight, DeviceType > &energy)
void	get_toroidally_averaged_moments (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const VelocityGrid &vgrid, const DomainDecomposition< DeviceType > &pol_decomp, const MagneticField< DeviceType > &magnetic_field, Species< DeviceType > &species, const View< double *, CLayout, DeviceType > &density, const View< double *, CLayout, DeviceType > &flow, const View< double *, CLayout, DeviceType > &energy, const View< double *, CLayout, DeviceType > &total_density, int ROOT_RANK)
void	correct_for_quasineutrality_method1 (Plasma &plasma, View< double **, CLayout, DeviceType > &density_adjustment)
void	correct_for_quasineutrality_method2 (Plasma &plasma, const View< double **, CLayout, DeviceType > &total_density, View< double **, CLayout, DeviceType > &density_adjustment)
void	correct_for_quasineutrality (Plasma &plasma, const View< double **, CLayout, DeviceType > &total_density, View< double **, CLayout, DeviceType > &density_adjustment)
void	all_species_f0_update_analytic_f0 (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const VelocityGrid &vgrid, const DomainDecomposition< DeviceType > &pol_decomp, const MagneticField< DeviceType > &magnetic_field, const ElectricField< DeviceType > &electric_field, Smoothing &smoothing, Plasma &plasma)

Function Documentation

all_species_f0_update_analytic_f0()

void all_species_f0_update_analytic_f0	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const VelocityGrid &	vgrid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const MagneticField< DeviceType > &	magnetic_field,
		const ElectricField< DeviceType > &	electric_field,
		Smoothing &	smoothing,
		Plasma &	plasma
	)

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bound_moments()

void bound_moments	(	const DomainDecomposition< DeviceType > &	pol_decomp,
		const Grid< DeviceType > &	grid,
		const MagneticField< DeviceType > &	magnetic_field,
		const Species< DeviceType > &	species,
		const View< double **, CLayout, DeviceType > &	damped_delta,
		const View< double *, CLayout, DeviceType > &	density_adjustment,
		const View< double *, CLayout, DeviceType > &	flow_adjustment,
		const View< double *, CLayout, DeviceType > &	energy_adjustment
	)

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calculate_delta_moments()

void calculate_delta_moments	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const MagneticField< DeviceType > &	magnetic_field,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		Smoothing &	smoothing,
		const Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	flow,
		const View< double *, CLayout, DeviceType > &	energy,
		const View< double *, CLayout, DeviceType > &	density_adjustment,
		const View< double *, CLayout, DeviceType > &	flow_adjustment,
		const View< double *, CLayout, DeviceType > &	energy_adjustment
	)

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compute_damped_delta()

View<double**, CLayout, DeviceType> compute_damped_delta	(	const DomainDecomposition< DeviceType > &	pol_decomp,
		const Grid< DeviceType > &	grid,
		const MagneticField< DeviceType > &	magnetic_field,
		const Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	flow,
		const View< double *, CLayout, DeviceType > &	energy,
		double	damping_width,
		double	base_alpha
	)

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correct_for_quasineutrality()

void correct_for_quasineutrality	(	Plasma &	plasma,
		const View< double **, CLayout, DeviceType > &	total_density,
		View< double **, CLayout, DeviceType > &	density_adjustment
	)

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correct_for_quasineutrality_method1()

void correct_for_quasineutrality_method1	(	Plasma &	plasma,
		View< double **, CLayout, DeviceType > &	density_adjustment
	)

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correct_for_quasineutrality_method2()

void correct_for_quasineutrality_method2	(	Plasma &	plasma,
		const View< double **, CLayout, DeviceType > &	total_density,
		View< double **, CLayout, DeviceType > &	density_adjustment
	)

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flux_surface_average_moments()

void flux_surface_average_moments	(	const Grid< DeviceType > &	grid,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	flow,
		const View< double *, CLayout, DeviceType > &	energy
	)

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get_density_f0g_rho()

View<double**, CLayout, DeviceType> get_density_f0g_rho	(	const Grid< DeviceType > &	grid,
		const VelocityGrid &	vgrid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const Species< DeviceType > &	species
	)

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get_moments()

void get_moments	(	const Grid< DeviceType > &	grid,
		const MagneticField< DeviceType > &	magnetic_field,
		Species< DeviceType > &	species,
		Kokkos::View< double **, Kokkos::LayoutRight, DeviceType > &	density,
		Kokkos::View< double **, Kokkos::LayoutRight, DeviceType > &	flow,
		Kokkos::View< double **, Kokkos::LayoutRight, DeviceType > &	energy
	)

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get_toroidally_averaged_moments()

void get_toroidally_averaged_moments	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const VelocityGrid &	vgrid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const MagneticField< DeviceType > &	magnetic_field,
		Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	flow,
		const View< double *, CLayout, DeviceType > &	energy,
		const View< double *, CLayout, DeviceType > &	total_density,
		int	ROOT_RANK
	)

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get_total_density()

void get_total_density	(	const DomainDecomposition< DeviceType > &	pol_decomp,
		const Grid< DeviceType > &	grid,
		const Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	density_f0g,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	total_density
	)

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normalize_and_remove_adiabatic_term()

void normalize_and_remove_adiabatic_term	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const ElectricField< DeviceType > &	electric_field,
		Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	flow,
		const View< double *, CLayout, DeviceType > &	energy,
		const View< double *, CLayout, DeviceType > &	total_density
	)

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normalize_by_volume()

void normalize_by_volume	(	const Grid< DeviceType > &	grid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	total_density,
		const View< double *, CLayout, DeviceType > &	density,
		const View< double *, CLayout, DeviceType > &	flow,
		const View< double *, CLayout, DeviceType > &	energy
	)

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remove_adiabatic_response()

void remove_adiabatic_response	(	const DomainDecomposition< DeviceType > &	pol_decomp,
		const ElectricField< DeviceType > &	electric_field,
		const Species< DeviceType > &	species,
		double	dpot_te_limit,
		const View< double *, CLayout, DeviceType > &	energy,
		const View< double *, CLayout, DeviceType > &	density
	)

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smooth_and_filter()

void smooth_and_filter	(	const Grid< DeviceType > &	grid,
		const MagneticField< DeviceType > &	magnetic_field,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		Smoothing &	smoothing,
		View< double **, CLayout, DeviceType > &	damped_delta
	)

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update_species_f0_deltas()

void update_species_f0_deltas	(	const DomainDecomposition< DeviceType > &	pol_decomp,
		Species< DeviceType > &	species,
		const View< double *, CLayout, DeviceType > &	density_adjustment,
		const View< double *, CLayout, DeviceType > &	flow_adjustment,
		const View< double *, CLayout, DeviceType > &	energy_adjustment
	)

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