#include "timer_macro.hpp"
#include "my_subview.hpp"
#include "sml.hpp"
#include "gradparx2.hpp"
#include "field_following_coordinates.hpp"
#include "matrix.hpp"
#include "gradient_matrices.hpp"
#include "get_potential_grad.hpp"

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Classes
struct	GetPotentialGradTempViews< Device >

Functions
int *	get_psn_ff_1dp_tr_loc ()

double *	get_psn_ff_1dp_p_loc ()

double *	get_psn_ff_1dp_dx_loc ()

rtype *	get_psn_pbd0_2_iseg_loc ()

int	get_psn_pbd0_2_nseg ()

void	get_field_Ah_cv_ff ()

void	get_pot_epar_em_filter (double tmp, double E_para_em)

void	get_gyro_avg_mat_data (int ind, int m, int n, int w, int nnz, int is_csr_int, int csr_ridx_or_eindex, int csr_cidx_or_nelement, double *values)

void	get_pot_convert_to_ff (const Grid< DeviceType > &grid, FieldFollowingCoordinates &ff, GetPotentialGradTempViews< DeviceType > &tmp, bool convert_00_field)

void	broadcast_potentials (const Grid< DeviceType > &grid, const DomainDecomposition< DeviceType > &pol_decomp, bool calculate_E_para_em, GetPotentialGradTempViews< DeviceType > &tmp)

template<typename VectorT >
void	transpose_and_set_vector_field (const Grid< DeviceType > &grid, GetPotentialGradTempViews< DeviceType > &tmp, GridField< VectorT > &dfield)

void	get_pot_grad (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const ElectricField< DeviceType > &electric_field, const GradientMatrices< DeviceType > &grad_matrices, GetPotentialGradTempViews< DeviceType > &tmp, bool calculate_E)

void	assign_to_tmp (GetPotentialGradTempViews< DeviceType > &tmp)

void	get_pot_mat_mult (const Grid< DeviceType > &grid, const DomainDecomposition< DeviceType > &pol_decomp, GetPotentialGradTempViews< DeviceType > &tmp, const std::vector< Matrix< DeviceType >> &gyro_avg_matrices, bool calculate_E_para_em)

template<typename FieldT , typename ScalarT , typename VectorT >
void	get_field_grad (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const DomainDecomposition< DeviceType > &pol_decomp, const MagneticField< DeviceType > &magnetic_field, ElectricField< DeviceType > &electric_field, const GradientMatrices< DeviceType > &grad_matrices, FieldFollowingCoordinates &ff, std::vector< Matrix< DeviceType >> &gyro_avg_matrices, FieldT &psn_field, GetPotentialGradTempViews< DeviceType > &tmp, GridField< ScalarT > &field, GridField< VectorT > &dfield, bool calculate_E, bool do_get_E00)

void	get_potential_grad (const Simulation< DeviceType > &sml, const Grid< DeviceType > &grid, const DomainDecomposition< DeviceType > &pol_decomp, const MagneticField< DeviceType > &magnetic_field, ElectricField< DeviceType > &electric_field)

Function Documentation

void assign_to_tmp ( GetPotentialGradTempViews< DeviceType > & tmp )

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void broadcast_potentials	(	const Grid< DeviceType > &	grid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		bool	calculate_E_para_em,
		GetPotentialGradTempViews< DeviceType > &	tmp
	)

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void get_field_Ah_cv_ff ( )

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template<typename FieldT , typename ScalarT , typename VectorT >

void get_field_grad	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const MagneticField< DeviceType > &	magnetic_field,
		ElectricField< DeviceType > &	electric_field,
		const GradientMatrices< DeviceType > &	grad_matrices,
		FieldFollowingCoordinates &	ff,
		std::vector< Matrix< DeviceType >> &	gyro_avg_matrices,
		FieldT &	psn_field,
		GetPotentialGradTempViews< DeviceType > &	tmp,
		GridField< ScalarT > &	field,
		GridField< VectorT > &	dfield,
		bool	calculate_E,
		bool	do_get_E00
	)

Calculates a gyro-averaged potential and its gradients, in field-following coordinates (if XGC1). The calculations inside the calculate_E flag can probably be refactored and pulled out of get_field_grad for clarity.

Parameters

[in]	grid	is the grid object
[in]	magnetic_field	is the magnetic field object
[in]	psn_field	is the input potential
[out]	psn_field_rho_ff	is the gyroaveraged potential (field-following if XGC1)
[out]	psn_dfield_rho_ff	is the gyroaveraged gradient (field-following if XGC1)
[in]	calculate_E_int	is 1 if calculating E, which has some extra steps compared to the As or Ah calculation

Returns: void

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void get_gyro_avg_mat_data	(	int	ind,
		int *	m,
		int *	n,
		int *	w,
		int *	nnz,
		int *	is_csr_int,
		int **	csr_ridx_or_eindex,
		int **	csr_cidx_or_nelement,
		double **	values
	)

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void get_pot_convert_to_ff	(	const Grid< DeviceType > &	grid,
		FieldFollowingCoordinates &	ff,
		GetPotentialGradTempViews< DeviceType > &	tmp,
		bool	convert_00_field
	)

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void get_pot_epar_em_filter	(	double *	tmp,
		double *	E_para_em
	)

void get_pot_grad	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const ElectricField< DeviceType > &	electric_field,
		const GradientMatrices< DeviceType > &	grad_matrices,
		GetPotentialGradTempViews< DeviceType > &	tmp,
		bool	calculate_E
	)

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void get_pot_mat_mult	(	const Grid< DeviceType > &	grid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		GetPotentialGradTempViews< DeviceType > &	tmp,
		const std::vector< Matrix< DeviceType >> &	gyro_avg_matrices,
		bool	calculate_E_para_em
	)

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void get_potential_grad	(	const Simulation< DeviceType > &	sml,
		const Grid< DeviceType > &	grid,
		const DomainDecomposition< DeviceType > &	pol_decomp,
		const MagneticField< DeviceType > &	magnetic_field,
		ElectricField< DeviceType > &	electric_field
	)

Calculates gyro-averaged electric field, electric potential in field-following coordinates (if XGC1) If EM, also calculates analogous magnetic potential and gradients

Parameters